This is BRIDGEcereal Barley Page
Main
Instruction
Wheat
Maize
Sorghum
Rice
Barley
Reference
Barley Alignment output
Transcript name (such as HORVU.MOREX.r3.1HG0000020.1 for Morex) or YourID for fasta sequence
(1) Check Transcript ID
Pick Genome (Please select one!) :
Akashinriki
B1K
Barke
GoldenPromise
Hockett
HOR10350
HOR13821
HOR13942
HOR21599
HOR3081
HOR3365
HOR7552
HOR8148
HOR9043
Igri
Morex
OUN333
RGTPlanet
ZDM01467
ZDM02064
Chromosome (Please select one!)
chr1H
chr2H
chr3H
chr4H
chr5H
chr6H
chr7H
CDS (Coding sequence); OR your fasta sequence :
CDS
fasta_seq
Your fasta sequence (Please add first line: >YourID Before pasting your DNA sequence!)
Upload Parent1 (Format: Parent1_chr**.fa.gz)
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Upload Parent2 (Format: Parent2_chr**.fa.gz)
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Upstream (kb), max input should <=100 (kb)
Downstream (kb), max input should <=100 (kb)
Genomes (Defalt: all genomes selected) :
Akashinriki
B1K
Barke
GoldenPromise
Hockett
HOR10350
HOR13821
HOR13942
HOR21599
HOR3081
HOR3365
HOR7552
HOR8148
HOR9043
Igri
Morex
OUN333
RGTPlanet
ZDM01467
ZDM02064
Distance filter between mapped clusters (1kb-50kb) :
Expected CDS size compared to Reference (fold change:0.25-4) :
(2) Submit
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