This is BRIDGEcereal Sorghum Page
Main
Instruction
Wheat
Maize
Sorghum
Rice
Barley
Reference
Sorghum Alignment output
Transcript name (such as Sobic.001G001066.1 for BTx623) or YourID for fasta sequence
(1) Check Transcript ID
Pick Genome (Please select one!) :
313
353
AusTRCF317961
BTx623
BTx642
IS12661
IS19953
IS3614
IS8525
IS929
Ji2731
PI525695
PI532566
PI536008
R931945
Rio
RTx430
S369
SC187
Chromosome (Please select one!)
chr1
chr10
chr2
chr3
chr4
chr5
chr6
chr7
chr8
chr9
CDS (Coding sequence); OR your fasta sequence :
CDS
fasta_seq
Your fasta sequence (Please add first line: >YourID Before pasting your DNA sequence!)
Upload Parent1 (Format: Parent1_chr**.fa.gz)
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Upload Parent2 (Format: Parent2_chr**.fa.gz)
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Upstream (kb), max input should <=100 (kb)
Downstream (kb), max input should <=100 (kb)
Genomes (Defalt: all genomes selected) :
313
353
AusTRCF317961
BTx623
BTx642
IS12661
IS19953
IS3614
IS8525
IS929
Ji2731
PI525695
PI532566
PI536008
R931945
Rio
RTx430
S369
SC187
Distance filter between mapped clusters (1kb-50kb) :
Expected CDS size compared to Reference (fold change:0.25-4) :
(2) Submit
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