This is BRIDGEcereal Maize Page
Main
Instruction
Wheat
Maize
Sorghum
Rice
Barley
Reference
Maize Alignment output
Transcript name (such as Zm00001eb000140.1 for B73) or YourID for fasta sequence
(1) Check Transcript ID
Pick Genome (Please select one!) :
A632
B73
B97
Chang-7-2
CML103
CML228
CML247
CML277
CML322
CML333
CML52
CML69
Dan340
HP301
Huangzaosi
Il14H
Jing724
Jing92
Ki11
Ki3
Ky21
M162W
M37W
Mo17_T2T
Mo18W
Ms71
NC350
NC358
Oh43
Oh43-CAAS
Oh7B
P39
PH207-CAAS
S37
Tx303
Tzi8
Xu178
Ye478
Zheng58
Chromosome (Please select one!)
chr1
chr10
chr2
chr3
chr4
chr5
chr6
chr7
chr8
chr9
CDS (Coding sequence); OR your fasta sequence :
CDS
fasta_seq
Your fasta sequence (Please add first line: >YourID Before pasting your DNA sequence!)
Upload Parent1 (Format: Parent1_chr**.fa.gz)
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Upload Parent2 (Format: Parent2_chr**.fa.gz)
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Upstream (kb), max input should <=100 (kb)
Downstream (kb), max input should <=100 (kb)
Genomes (Defalt: all genomes selected) :
A632
B73
B97
Chang-7-2
CML103
CML228
CML247
CML277
CML322
CML333
CML52
CML69
Dan340
HP301
Huangzaosi
Il14H
Jing724
Jing92
Ki11
Ki3
Ky21
M162W
M37W
Mo17_T2T
Mo18W
Ms71
NC350
NC358
Oh43
Oh43-CAAS
Oh7B
P39
PH207-CAAS
S37
Tx303
Tzi8
Xu178
Ye478
Zheng58
Distance filter between mapped clusters (1kb-50kb) :
Expected CDS size compared to Reference (fold change:0.25-4) :
(2) Submit
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